Cluster: HRGMv2_2235_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2235
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2235_5 | HRGMv2_2235_5_72 | 72176 | 73327 | - | 9.A.47.2.1 |
| STP | HRGMv2_2235_5 | HRGMv2_2235_5_73 | 73600 | 75003 | - | EAL | GGDEF |
| NULL(UNKNOWN) | HRGMv2_2235_5 | HRGMv2_2235_5_74 | 75186 | 75299 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2235_5 | HRGMv2_2235_5_75 | 75319 | 77148 | - | 3.A.1.120.6 |
| CAZyme | HRGMv2_2235_5 | HRGMv2_2235_5_76 | 77346 | 79349 | + | GH2 |
| TC | HRGMv2_2235_5 | HRGMv2_2235_5_77 | 79252 | 80616 | - | 2.A.66.1.33 |
Gene ID: HRGMv2_2235_5_72
Type: TC
Location: 72176 - 73327 (-)
Type: TC
Location: 72176 - 73327 (-)
Gene ID: HRGMv2_2235_5_73
Type: STP
Location: 73600 - 75003 (-)
Type: STP
Location: 73600 - 75003 (-)
Gene ID: HRGMv2_2235_5_74
Type:
Location: 75186 - 75299 (+)
Type:
Location: 75186 - 75299 (+)
Gene ID: HRGMv2_2235_5_75
Type: TC
Location: 75319 - 77148 (-)
Type: TC
Location: 75319 - 77148 (-)
Gene ID: HRGMv2_2235_5_76
Type: CAZyme
Location: 77346 - 79349 (+)
Type: CAZyme
Location: 77346 - 79349 (+)
Gene ID: HRGMv2_2235_5_77
Type: TC
Location: 79252 - 80616 (-)
Type: TC
Location: 79252 - 80616 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900766575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.