Cluster: HRGMv2_2235_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2235
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2235_5 | HRGMv2_2235_5_56 | 56450 | 57472 | - | GT2 |
| TC | HRGMv2_2235_5 | HRGMv2_2235_5_57 | 57503 | 58225 | - | 3.A.1.3.25 |
| TC | HRGMv2_2235_5 | HRGMv2_2235_5_58 | 58212 | 58901 | - | 3.A.1.3.2 |
| TC | HRGMv2_2235_5 | HRGMv2_2235_5_59 | 59056 | 59898 | - | 3.A.1.3.27 |
Gene ID: HRGMv2_2235_5_56
Type: CAZyme
Location: 56450 - 57472 (-)
Type: CAZyme
Location: 56450 - 57472 (-)
Gene ID: HRGMv2_2235_5_57
Type: TC
Location: 57503 - 58225 (-)
Type: TC
Location: 57503 - 58225 (-)
Gene ID: HRGMv2_2235_5_58
Type: TC
Location: 58212 - 58901 (-)
Type: TC
Location: 58212 - 58901 (-)
Gene ID: HRGMv2_2235_5_59
Type: TC
Location: 59056 - 59898 (-)
Type: TC
Location: 59056 - 59898 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900766575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.