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Cluster: HRGMv2_2234_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2234_53 HRGMv2_2234_53_4 3803 4684 + 2.A.7.28.11
pfam HRGMv2_2234_53 HRGMv2_2234_53_5 4684 7218 + GCS2
NULL(UNKNOWN) HRGMv2_2234_53 HRGMv2_2234_53_6 7215 8129 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2234_53 HRGMv2_2234_53_7 8801 10426 + 2.A.35.2.1
TC HRGMv2_2234_53 HRGMv2_2234_53_8 10838 11461 + 2.A.87.1.4
pfam HRGMv2_2234_53 HRGMv2_2234_53_9 11458 12252 + Creatininase
NULL(UNKNOWN) HRGMv2_2234_53 HRGMv2_2234_53_10 12300 14540 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2234_53 HRGMv2_2234_53_11 14819 17350 + GH3
Gene ID: HRGMv2_2234_53_4
Type: TC
Location: 3803 - 4684 (+)
Gene ID: HRGMv2_2234_53_5
Type: pfam
Location: 4684 - 7218 (+)
Gene ID: HRGMv2_2234_53_6
Type:
Location: 7215 - 8129 (-)
Gene ID: HRGMv2_2234_53_7
Type: TC
Location: 8801 - 10426 (+)
Gene ID: HRGMv2_2234_53_8
Type: TC
Location: 10838 - 11461 (+)
Gene ID: HRGMv2_2234_53_9
Type: pfam
Location: 11458 - 12252 (+)
Gene ID: HRGMv2_2234_53_10
Type:
Location: 12300 - 14540 (-)
Gene ID: HRGMv2_2234_53_11
Type: CAZyme
Location: 14819 - 17350 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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