Cluster: HRGMv2_2222_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2222
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2222_10 | HRGMv2_2222_10_29 | 26022 | 27428 | + | 2.A.86.1.8 |
| pfam | HRGMv2_2222_10 | HRGMv2_2222_10_30 | 27657 | 30083 | + | TPR_8 |
| CAZyme | HRGMv2_2222_10 | HRGMv2_2222_10_31 | 30100 | 32004 | + | CBM48 | GH13_9 |
Gene ID: HRGMv2_2222_10_29
Type: TC
Location: 26022 - 27428 (+)
Type: TC
Location: 26022 - 27428 (+)
Gene ID: HRGMv2_2222_10_30
Type: pfam
Location: 27657 - 30083 (+)
Type: pfam
Location: 27657 - 30083 (+)
Gene ID: HRGMv2_2222_10_31
Type: CAZyme
Location: 30100 - 32004 (+)
Type: CAZyme
Location: 30100 - 32004 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp934307695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.