Cluster: HRGMv2_2222_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2222
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2222_9 | HRGMv2_2222_9_32 | 34793 | 36406 | - | GH13_31 |
| CAZyme | HRGMv2_2222_9 | HRGMv2_2222_9_33 | 36489 | 38495 | - | GH42 |
| pfam | HRGMv2_2222_9 | HRGMv2_2222_9_34 | 38632 | 39345 | - | SurE |
| TC | HRGMv2_2222_9 | HRGMv2_2222_9_35 | 39483 | 42308 | - | 3.A.11.1.1 |
Gene ID: HRGMv2_2222_9_32
Type: CAZyme
Location: 34793 - 36406 (-)
Type: CAZyme
Location: 34793 - 36406 (-)
Gene ID: HRGMv2_2222_9_33
Type: CAZyme
Location: 36489 - 38495 (-)
Type: CAZyme
Location: 36489 - 38495 (-)
Gene ID: HRGMv2_2222_9_34
Type: pfam
Location: 38632 - 39345 (-)
Type: pfam
Location: 38632 - 39345 (-)
Gene ID: HRGMv2_2222_9_35
Type: TC
Location: 39483 - 42308 (-)
Type: TC
Location: 39483 - 42308 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp934307695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.