Cluster: HRGMv2_2222_CGC30
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2222
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2222_47 | HRGMv2_2222_47_8 | 8140 | 9702 | - | CE20 |
| STP | HRGMv2_2222_47 | HRGMv2_2222_47_9 | 9696 | 12215 | - | EAL | GGDEF | Response_reg |
| TC | HRGMv2_2222_47 | HRGMv2_2222_47_10 | 12569 | 13990 | - | 2.A.66.1.32 |
Gene ID: HRGMv2_2222_47_8
Type: CAZyme
Location: 8140 - 9702 (-)
Type: CAZyme
Location: 8140 - 9702 (-)
Gene ID: HRGMv2_2222_47_9
Type: STP
Location: 9696 - 12215 (-)
Type: STP
Location: 9696 - 12215 (-)
Gene ID: HRGMv2_2222_47_10
Type: TC
Location: 12569 - 13990 (-)
Type: TC
Location: 12569 - 13990 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp934307695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.