Cluster: HRGMv2_2222_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2222
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2222_4 | HRGMv2_2222_4_59 | 71050 | 71775 | - | 3.A.1.23.5 |
| pfam | HRGMv2_2222_4 | HRGMv2_2222_4_60 | 71792 | 72592 | - | CbiQ |
| TC | HRGMv2_2222_4 | HRGMv2_2222_4_61 | 72589 | 73602 | - | 3.A.1.23.3 |
| TC | HRGMv2_2222_4 | HRGMv2_2222_4_62 | 73707 | 76280 | - | 3.A.5.1.1 |
| CAZyme | HRGMv2_2222_4 | HRGMv2_2222_4_63 | 76395 | 78398 | - | GH127 |
Gene ID: HRGMv2_2222_4_59
Type: TC
Location: 71050 - 71775 (-)
Type: TC
Location: 71050 - 71775 (-)
Gene ID: HRGMv2_2222_4_60
Type: pfam
Location: 71792 - 72592 (-)
Type: pfam
Location: 71792 - 72592 (-)
Gene ID: HRGMv2_2222_4_61
Type: TC
Location: 72589 - 73602 (-)
Type: TC
Location: 72589 - 73602 (-)
Gene ID: HRGMv2_2222_4_62
Type: TC
Location: 73707 - 76280 (-)
Type: TC
Location: 73707 - 76280 (-)
Gene ID: HRGMv2_2222_4_63
Type: CAZyme
Location: 76395 - 78398 (-)
Type: CAZyme
Location: 76395 - 78398 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp934307695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.