Cluster: HRGMv2_2222_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2222
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2222_15 | HRGMv2_2222_15_47 | 52352 | 53620 | + | CE4 |
| pfam | HRGMv2_2222_15 | HRGMv2_2222_15_48 | 53645 | 55246 | + | HHH_3 |
| pfam | HRGMv2_2222_15 | HRGMv2_2222_15_49 | 55319 | 56128 | + | DUF4130 |
| TC | HRGMv2_2222_15 | HRGMv2_2222_15_50 | 56337 | 57998 | + | 2.A.53.3.11 |
Gene ID: HRGMv2_2222_15_47
Type: CAZyme
Location: 52352 - 53620 (+)
Type: CAZyme
Location: 52352 - 53620 (+)
Gene ID: HRGMv2_2222_15_48
Type: pfam
Location: 53645 - 55246 (+)
Type: pfam
Location: 53645 - 55246 (+)
Gene ID: HRGMv2_2222_15_49
Type: pfam
Location: 55319 - 56128 (+)
Type: pfam
Location: 55319 - 56128 (+)
Gene ID: HRGMv2_2222_15_50
Type: TC
Location: 56337 - 57998 (+)
Type: TC
Location: 56337 - 57998 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp934307695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.