Cluster: HRGMv2_2222_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2222
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2222_15 | HRGMv2_2222_15_23 | 21122 | 23596 | + | GH74 | GH74 | GH74 |
| CAZyme | HRGMv2_2222_15 | HRGMv2_2222_15_24 | 23611 | 25680 | + | GH31_4 |
| TC | HRGMv2_2222_15 | HRGMv2_2222_15_25 | 25817 | 27742 | - | 3.A.1.135.5 |
| TC | HRGMv2_2222_15 | HRGMv2_2222_15_26 | 27742 | 29490 | - | 3.A.1.135.5 |
Gene ID: HRGMv2_2222_15_23
Type: CAZyme
Location: 21122 - 23596 (+)
Type: CAZyme
Location: 21122 - 23596 (+)
Gene ID: HRGMv2_2222_15_24
Type: CAZyme
Location: 23611 - 25680 (+)
Type: CAZyme
Location: 23611 - 25680 (+)
Gene ID: HRGMv2_2222_15_25
Type: TC
Location: 25817 - 27742 (-)
Type: TC
Location: 25817 - 27742 (-)
Gene ID: HRGMv2_2222_15_26
Type: TC
Location: 27742 - 29490 (-)
Type: TC
Location: 27742 - 29490 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter sp934307695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.