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Cluster: HRGMv2_2215_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2215_13 HRGMv2_2215_13_4 2776 3699 + 3.A.1.1.29
NULL(UNKNOWN) HRGMv2_2215_13 HRGMv2_2215_13_5 3781 5589 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2215_13 HRGMv2_2215_13_6 5748 7760 + GH120 | GH120
peptidase HRGMv2_2215_13 HRGMv2_2215_13_7 7845 10490 + S09.UPW
NULL(UNKNOWN) HRGMv2_2215_13 HRGMv2_2215_13_8 10492 10719 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2215_13 HRGMv2_2215_13_9 10755 12239 + GH43_27
CAZyme HRGMv2_2215_13 HRGMv2_2215_13_10 12275 13741 + GH29
Gene ID: HRGMv2_2215_13_4
Type: TC
Location: 2776 - 3699 (+)
Gene ID: HRGMv2_2215_13_5
Type:
Location: 3781 - 5589 (+)
Gene ID: HRGMv2_2215_13_6
Type: CAZyme
Location: 5748 - 7760 (+)
Gene ID: HRGMv2_2215_13_7
Type: peptidase
Location: 7845 - 10490 (+)
Gene ID: HRGMv2_2215_13_8
Type:
Location: 10492 - 10719 (+)
Gene ID: HRGMv2_2215_13_9
Type: CAZyme
Location: 10755 - 12239 (+)
Gene ID: HRGMv2_2215_13_10
Type: CAZyme
Location: 12275 - 13741 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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