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PROTEIN: HRGMv2_2215_13_5

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_2215_13_5.pdb
Genome ID:
HRGMv2_2215
Protein ID:
HRGMv2_2215_13_5

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Detailed structural information will appear here after analysis...

Protein Sequence 
MEMKRATSLV   LVSAMTAGLL   AGCGSGGAQQ   SGDVSSTAES   TASATSEAAA   TADTQAAAAE 60
KPEVSHDEEM   TFEIYDAAAN   YQGEQTGWFA   KVLKDNLNIK   VNIVAPQVAG   DAVYQTRASS 120
GNLGDIVILD   GTQFNDCLSA   GLVKDISADI   YKYPNLAAYQ   EQIDVFNESL   DGIQKGQIYG 180
IPCQVTDTSP   LTYSQALIYS   APLLRWDRYK   EIGEPDIKDL   DGLLDALEAI   HKAHPKNDKG 240
DPEYPLSLWA   DWDGGDGMIG   IANVVQLTTW   YGEKIKGSAI   LKSDNTFTSL   TDKNASYYKM 300
LQFLNHAYQR   GLVDPDSGTQ   DWNSVMTKIS   NGQIDLMWYN   WQRGFWNSLD   RLHNGTAYTF 360
IPVDDQNYYT   DSDTYFGSGR   VFGIGSQVDD   EKYQRILDFL   DWYASPDGLR   FQHDGIKDFN 420
YTVGSDGKLT   LINDNALMDN   LPVPEEYGGG   GYNDGNNQIN   QWICDAICTD   PTTGEPYNTN 480
YWSSYLEDQN   EGTMEEWSKK   FDATDATDWM   KKNGKLLVSP   NVPYTVKSDD   ADMSVIRNQV 540
NQSVCDYSWK   MVFAKSDKEF   DQMWDAMAEE   LNGFGFETLY   QFDCDNYQGQ   VDAKIEAAKE 600
AQ 602
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q8DRJ6-F1-model_v4 6 596 31 514 0.6294 0.7318
AF-O53485-F1-model_v4 15 586 20 439 0.5609 0.6865
AF-Q7AQ51-F1-model_v4 16 583 24 444 0.5481 0.6747
AF-K0F002-F1-model_v4 62 582 44 439 0.5477 0.7058
AF-K0F8J3-F1-model_v4 67 583 29 434 0.5424 0.6815
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 59 593 40 506 0.6581 0.7838
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 59 593 40 506 0.6581 0.7838
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5xs8-assembly1.cif.gz_A 68 590 1 474 0.7053 0.8042
5g62-assembly2.cif.gz_B 65 600 1 491 0.6944 0.7815
6jhx-assembly2.cif.gz_B 60 593 3 483 0.6894 0.7839
5h6u-assembly1.cif.gz_A 61 596 1 487 0.6894 0.7787
4tqu-assembly1.cif.gz_Q 60 596 3 492 0.6874 0.7765
3vlw-assembly2.cif.gz_B 60 596 2 489 0.6858 0.7752
5swa-assembly1.cif.gz_A 66 596 1 448 0.6712 0.7825
5swb-assembly4.cif.gz_G 68 599 1 453 0.661 0.7682
5suo-assembly1.cif.gz_A 64 596 1 451 0.6501 0.7578
6fth-assembly1.cif.gz_A 62 593 2 496 0.6443 0.7256
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H2URD6-F1-model_v4 57 600 37 538 0.6041 0.699
AF-D4GP35-F1-model_v4 13 582 13 459 0.5875 0.6962
AF-O58758-F1-model_v4 63 582 41 420 0.5678 0.7422
AF-Q795R2-F1-model_v4 58 592 35 498 0.5588 0.6676
AF-P58300-F1-model_v4 43 582 44 433 0.5563 0.7215
AF-Q9V297-F1-model_v4 31 582 40 452 0.5498 0.6934
Download Full SwissProt Results