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Cluster: HRGMv2_2204_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2204_12 HRGMv2_2204_12_51 56805 57620 + 3.A.1.104.1
TC HRGMv2_2204_12 HRGMv2_2204_12_52 57645 58913 + 3.A.1.103.6
pfam HRGMv2_2204_12 HRGMv2_2204_12_53 58926 59840 + CMAS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25
NULL(UNKNOWN) HRGMv2_2204_12 HRGMv2_2204_12_54 59843 61126 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2204_12 HRGMv2_2204_12_55 61133 63619 + GT2 | GT2
CAZyme HRGMv2_2204_12 HRGMv2_2204_12_56 63645 66044 + GT2 | GT2
peptidase HRGMv2_2204_12 HRGMv2_2204_12_57 66130 67398 - S11.UPW
CAZyme HRGMv2_2204_12 HRGMv2_2204_12_58 67541 69370 + GT2 | GT2
CAZyme HRGMv2_2204_12 HRGMv2_2204_12_59 69384 70340 + GT2
pfam HRGMv2_2204_12 HRGMv2_2204_12_60 70377 71852 + Glucos_trans_II
TC HRGMv2_2204_12 HRGMv2_2204_12_61 71945 73342 + 9.B.18.1.1
pfam HRGMv2_2204_12 HRGMv2_2204_12_62 73332 74633 + LytR_cpsA_psr
CAZyme HRGMv2_2204_12 HRGMv2_2204_12_63 74720 75634 + GT2
Gene ID: HRGMv2_2204_12_51
Type: TC
Location: 56805 - 57620 (+)
Gene ID: HRGMv2_2204_12_52
Type: TC
Location: 57645 - 58913 (+)
Gene ID: HRGMv2_2204_12_53
Type: pfam
Location: 58926 - 59840 (+)
Gene ID: HRGMv2_2204_12_54
Type:
Location: 59843 - 61126 (+)
Gene ID: HRGMv2_2204_12_55
Type: CAZyme
Location: 61133 - 63619 (+)
Gene ID: HRGMv2_2204_12_56
Type: CAZyme
Location: 63645 - 66044 (+)
Gene ID: HRGMv2_2204_12_57
Type: peptidase
Location: 66130 - 67398 (-)
Gene ID: HRGMv2_2204_12_58
Type: CAZyme
Location: 67541 - 69370 (+)
Gene ID: HRGMv2_2204_12_59
Type: CAZyme
Location: 69384 - 70340 (+)
Gene ID: HRGMv2_2204_12_60
Type: pfam
Location: 70377 - 71852 (+)
Gene ID: HRGMv2_2204_12_61
Type: TC
Location: 71945 - 73342 (+)
Gene ID: HRGMv2_2204_12_62
Type: pfam
Location: 73332 - 74633 (+)
Gene ID: HRGMv2_2204_12_63
Type: CAZyme
Location: 74720 - 75634 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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