PROTEIN: HRGMv2_2204_12_54
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Protein File & Metadata
Source:
HRGMv2_2204_12_54.pdb
Genome ID:
Protein ID:
HRGMv2_2204_12_54
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Protein Sequence
MERILYTKYS NERTAQFAIR TDIVEKDGSR QVRKKAYYEA GKPHIRKIYE AYEQLSCSFS 60 STRLLINQCR WEEDGIYLEY LKGQTLQEEL DRLLEKRKIE KFQKILREYM ELILQTAENP 120 FCMTEEFRKV FGDVKLREGF YSAPVTDIDM VLSNIFIDEK GEWTLIDYEW TFLFPIPIQF 180 VLYRILHYYE CSNAFRSQIA AWDLYAAAGI SPEDREVFLE MEKHFQAYVI GNYVPLRKLY 240 PKISPGKTGL HTVLKRTGSP ERVQIFLSQD GILREEESES YAMPDGKVKL RIEIGSRIRR 300 IRLDPGEQAG RVRLKRLEWE NGEKCQVRTN GIVQSDQTFL FLEEDPQIYI ESIPANPGFL 360 CLEISKDSGQ DGYVQQILKE KAEMNRQKEE VEALKKQLAE KEKLIAAMEN TKVWKTYTKY 420 KKVIKGE 427
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q9AGZ0-F1-model_v4 | GT2 | 2 | 289 | 1 | 277 | 0.4291 |
0.7683 |
| AF-D9R088-F1-model_v4 | GT2 , GT4 | 1 | 372 | 1 | 741 | 0.4215 |
0.6782 |
| A0A4P9E9V2 | GT2 , GT4 | 1 | 360 | 300 | 1332 | 0.3819 |
0.7306 |
| A0A2T4T973 | GT2 , GT4 | 1 | 407 | 261 | 860 | 0.3742 |
0.5859 |
| A0A239QLG0 | GT2 | 1 | 253 | 1 | 270 | 0.3742 |
0.8464 |
| A0A829WPC6 | GT2 , GT4 | 1 | 293 | 262 | 543 | 0.3678 |
0.8182 |
| C6LFR9 | GT2 , GT4 | 1 | 383 | 300 | 677 | 0.3654 |
0.6678 |
| QWT52131.1 | GT2 | 1 | 265 | 1 | 451 | 0.3624 |
0.8046 |
| AF-A0A385Q4F2-F1-model_v4 | GT2 , GT4 | 1 | 335 | 232 | 512 | 0.3311 |
0.7208 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4P9E9V2 | GT2 , GT4 | 1 | 360 | 300 | 1332 | 0.3819 |
0.7306 |
| A0A2T4T973 | GT2 , GT4 | 1 | 407 | 261 | 860 | 0.3742 |
0.5859 |
| A0A239QLG0 | GT2 | 1 | 253 | 1 | 270 | 0.3742 |
0.8464 |
| A0A829WPC6 | GT2 , GT4 | 1 | 293 | 262 | 543 | 0.3678 |
0.8182 |
| C6LFR9 | GT2 , GT4 | 1 | 383 | 300 | 677 | 0.3654 |
0.6678 |
| QWT52131.1 | GT2 | 1 | 265 | 1 | 451 | 0.3624 |
0.8046 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.