Cluster: HRGMv2_2201_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2201
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2201_22 | HRGMv2_2201_22_7 | 7495 | 8574 | + | GT2 |
| pfam | HRGMv2_2201_22 | HRGMv2_2201_22_8 | 8626 | 9432 | + | Collagen |
| TF | HRGMv2_2201_22 | HRGMv2_2201_22_9 | 9560 | 10000 | + | MarR |
| TC | HRGMv2_2201_22 | HRGMv2_2201_22_10 | 9997 | 11328 | + | 2.A.66.1.7 |
Gene ID: HRGMv2_2201_22_7
Type: CAZyme
Location: 7495 - 8574 (+)
Type: CAZyme
Location: 7495 - 8574 (+)
Gene ID: HRGMv2_2201_22_8
Type: pfam
Location: 8626 - 9432 (+)
Type: pfam
Location: 8626 - 9432 (+)
Gene ID: HRGMv2_2201_22_9
Type: TF
Location: 9560 - 10000 (+)
Type: TF
Location: 9560 - 10000 (+)
Gene ID: HRGMv2_2201_22_10
Type: TC
Location: 9997 - 11328 (+)
Type: TC
Location: 9997 - 11328 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Massilistercora
Species
Massilistercora timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.