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Cluster: HRGMv2_2201_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2201_9 HRGMv2_2201_9_12 10412 11476 - 9.A.23.1.1
CAZyme HRGMv2_2201_9 HRGMv2_2201_9_13 11557 13194 - GH13_31
CAZyme HRGMv2_2201_9 HRGMv2_2201_9_14 13214 14665 - GH77
NULL(UNKNOWN) HRGMv2_2201_9 HRGMv2_2201_9_15 14826 15089 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2201_9 HRGMv2_2201_9_16 15120 15410 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2201_9 HRGMv2_2201_9_17 15455 15811 - 9.A.11.1.1
TC HRGMv2_2201_9 HRGMv2_2201_9_18 15897 16949 - 9.A.11.1.1
TC HRGMv2_2201_9 HRGMv2_2201_9_19 16916 17389 - 9.A.11.1.1
Gene ID: HRGMv2_2201_9_12
Type: TC
Location: 10412 - 11476 (-)
Gene ID: HRGMv2_2201_9_13
Type: CAZyme
Location: 11557 - 13194 (-)
Gene ID: HRGMv2_2201_9_14
Type: CAZyme
Location: 13214 - 14665 (-)
Gene ID: HRGMv2_2201_9_15
Type:
Location: 14826 - 15089 (+)
Gene ID: HRGMv2_2201_9_16
Type:
Location: 15120 - 15410 (+)
Gene ID: HRGMv2_2201_9_17
Type: TC
Location: 15455 - 15811 (-)
Gene ID: HRGMv2_2201_9_18
Type: TC
Location: 15897 - 16949 (-)
Gene ID: HRGMv2_2201_9_19
Type: TC
Location: 16916 - 17389 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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