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Cluster: HRGMv2_2195_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2195_9 HRGMv2_2195_9_83 72579 73169 + 9.B.18.1.3
pfam HRGMv2_2195_9 HRGMv2_2195_9_84 73185 74750 + Acetyltransf_1 | ATP-grasp_3 | CPSase_L_D2 | Dala_Dala_lig_C | FR47 | Acetyltransf_7 | ATP-grasp_4 | Acetyltransf_10
pfam HRGMv2_2195_9 HRGMv2_2195_9_85 74762 75958 + GARS_A | ATP-grasp | ATP-grasp_3 | CPSase_L_D2 | Dala_Dala_lig_C | ATP-grasp_4 | LAL_C2
CAZyme HRGMv2_2195_9 HRGMv2_2195_9_86 75952 77184 + GT4
CAZyme HRGMv2_2195_9 HRGMv2_2195_9_87 77185 78057 + GT2
CAZyme HRGMv2_2195_9 HRGMv2_2195_9_88 78128 78730 + CE4
NULL(UNKNOWN) HRGMv2_2195_9 HRGMv2_2195_9_89 79807 80085 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2195_9 HRGMv2_2195_9_90 80617 81807 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2195_9 HRGMv2_2195_9_91 82414 83316 + 2.A.66.2.16
pfam HRGMv2_2195_9 HRGMv2_2195_9_92 83364 84686 + UDPG_MGDP_dh | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_2195_9 HRGMv2_2195_9_93 84683 85921 + GT4
TC HRGMv2_2195_9 HRGMv2_2195_9_94 87304 88356 + 9.B.18.2.1
Gene ID: HRGMv2_2195_9_83
Type: TC
Location: 72579 - 73169 (+)
Gene ID: HRGMv2_2195_9_84
Type: pfam
Location: 73185 - 74750 (+)
Gene ID: HRGMv2_2195_9_85
Type: pfam
Location: 74762 - 75958 (+)
Gene ID: HRGMv2_2195_9_86
Type: CAZyme
Location: 75952 - 77184 (+)
Gene ID: HRGMv2_2195_9_87
Type: CAZyme
Location: 77185 - 78057 (+)
Gene ID: HRGMv2_2195_9_88
Type: CAZyme
Location: 78128 - 78730 (+)
Gene ID: HRGMv2_2195_9_89
Type:
Location: 79807 - 80085 (+)
Gene ID: HRGMv2_2195_9_90
Type:
Location: 80617 - 81807 (+)
Gene ID: HRGMv2_2195_9_91
Type: TC
Location: 82414 - 83316 (+)
Gene ID: HRGMv2_2195_9_92
Type: pfam
Location: 83364 - 84686 (+)
Gene ID: HRGMv2_2195_9_93
Type: CAZyme
Location: 84683 - 85921 (+)
Gene ID: HRGMv2_2195_9_94
Type: TC
Location: 87304 - 88356 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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