Cluster: HRGMv2_2195_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2195
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2195_8 | HRGMv2_2195_8_63 | 66199 | 66870 | + | GT26 |
| pfam | HRGMv2_2195_8 | HRGMv2_2195_8_64 | 67016 | 68104 | + | HTH_30 | GGDEF_2 |
| TC | HRGMv2_2195_8 | HRGMv2_2195_8_65 | 68121 | 68807 | + | 3.A.1.140.1 |
| pfam | HRGMv2_2195_8 | HRGMv2_2195_8_66 | 68797 | 69705 | + | FtsX | FtsX_ECD |
| STP | HRGMv2_2195_8 | HRGMv2_2195_8_67 | 69724 | 70836 | + | Peptidase_M23 |
| TC | HRGMv2_2195_8 | HRGMv2_2195_8_68 | 70854 | 72029 | + | 9.B.174.1.1 |
Gene ID: HRGMv2_2195_8_63
Type: CAZyme
Location: 66199 - 66870 (+)
Type: CAZyme
Location: 66199 - 66870 (+)
Gene ID: HRGMv2_2195_8_64
Type: pfam
Location: 67016 - 68104 (+)
Type: pfam
Location: 67016 - 68104 (+)
Gene ID: HRGMv2_2195_8_65
Type: TC
Location: 68121 - 68807 (+)
Type: TC
Location: 68121 - 68807 (+)
Gene ID: HRGMv2_2195_8_66
Type: pfam
Location: 68797 - 69705 (+)
Type: pfam
Location: 68797 - 69705 (+)
Gene ID: HRGMv2_2195_8_67
Type: STP
Location: 69724 - 70836 (+)
Type: STP
Location: 69724 - 70836 (+)
Gene ID: HRGMv2_2195_8_68
Type: TC
Location: 70854 - 72029 (+)
Type: TC
Location: 70854 - 72029 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Merdimonas
Species
Merdimonas faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.