Cluster: HRGMv2_2189_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2189
- CGC Family ID: CGCFAM_00250
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2189_1 | HRGMv2_2189_1_607 | 668683 | 670317 | + | 3.A.1.121.4 |
| CAZyme | HRGMv2_2189_1 | HRGMv2_2189_1_608 | 670382 | 671920 | - | CE4 |
| TC | HRGMv2_2189_1 | HRGMv2_2189_1_609 | 672228 | 674381 | - | 2.A.53.4.2 |
| TC | HRGMv2_2189_1 | HRGMv2_2189_1_610 | 674419 | 676380 | - | 2.A.16.2.2 |
Gene ID: HRGMv2_2189_1_607
Type: TC
Location: 668683 - 670317 (+)
Type: TC
Location: 668683 - 670317 (+)
Gene ID: HRGMv2_2189_1_608
Type: CAZyme
Location: 670382 - 671920 (-)
Type: CAZyme
Location: 670382 - 671920 (-)
Gene ID: HRGMv2_2189_1_609
Type: TC
Location: 672228 - 674381 (-)
Type: TC
Location: 672228 - 674381 (-)
Gene ID: HRGMv2_2189_1_610
Type: TC
Location: 674419 - 676380 (-)
Type: TC
Location: 674419 - 676380 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.