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Cluster: HRGMv2_2189_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2189_1 HRGMv2_2189_1_2707 3002994 3005024 + 3.A.2.2.2
TC HRGMv2_2189_1 HRGMv2_2189_1_2708 3005021 3005506 + 3.A.2.2.2
pfam HRGMv2_2189_1 HRGMv2_2189_1_2709 3005534 3006136 + vATP-synt_E
TC HRGMv2_2189_1 HRGMv2_2189_1_2710 3006155 3007129 + 3.A.2.2.2
pfam HRGMv2_2189_1 HRGMv2_2189_1_2711 3007122 3007448 + ATP-synt_F
TC HRGMv2_2189_1 HRGMv2_2189_1_2712 3007445 3009211 + 3.A.2.3.2
TC HRGMv2_2189_1 HRGMv2_2189_1_2713 3009212 3010585 + 3.A.2.2.2
TC HRGMv2_2189_1 HRGMv2_2189_1_2714 3010629 3011291 + 3.A.2.2.2
STP HRGMv2_2189_1 HRGMv2_2189_1_2715 3011455 3012033 - TetR_N
CAZyme HRGMv2_2189_1 HRGMv2_2189_1_2716 3012439 3013494 + CE4
Gene ID: HRGMv2_2189_1_2707
Type: TC
Location: 3002994 - 3005024 (+)
Gene ID: HRGMv2_2189_1_2708
Type: TC
Location: 3005021 - 3005506 (+)
Gene ID: HRGMv2_2189_1_2709
Type: pfam
Location: 3005534 - 3006136 (+)
Gene ID: HRGMv2_2189_1_2710
Type: TC
Location: 3006155 - 3007129 (+)
Gene ID: HRGMv2_2189_1_2711
Type: pfam
Location: 3007122 - 3007448 (+)
Gene ID: HRGMv2_2189_1_2712
Type: TC
Location: 3007445 - 3009211 (+)
Gene ID: HRGMv2_2189_1_2713
Type: TC
Location: 3009212 - 3010585 (+)
Gene ID: HRGMv2_2189_1_2714
Type: TC
Location: 3010629 - 3011291 (+)
Gene ID: HRGMv2_2189_1_2715
Type: STP
Location: 3011455 - 3012033 (-)
Gene ID: HRGMv2_2189_1_2716
Type: CAZyme
Location: 3012439 - 3013494 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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