dbCAN HGM

Cluster: HRGMv2_2189_CGC33

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2189_1	HRGMv2_2189_1_2578	2857475	2857747	+	3.A.1.135.9
pfam	HRGMv2_2189_1	HRGMv2_2189_1_2579	2857760	2858356	-	TetR_C_8
STP	HRGMv2_2189_1	HRGMv2_2189_1_2580	2858490	2860418	+	Pyr_redox_2
CAZyme	HRGMv2_2189_1	HRGMv2_2189_1_2581	2860683	2861786	+	GH179
pfam	HRGMv2_2189_1	HRGMv2_2189_1_2582	2861807	2862235	+	CGDB
pfam	HRGMv2_2189_1	HRGMv2_2189_1_2583	2862251	2863225	+	AP_endonuc_2
TC	HRGMv2_2189_1	HRGMv2_2189_1_2584	2863242	2864624	+	2.A.2.3.2
CAZyme	HRGMv2_2189_1	HRGMv2_2189_1_2585	2864789	2867215	+	GH39
pfam	HRGMv2_2189_1	HRGMv2_2189_1_2586	2867561	2868736	-	DEDD_Tnp_IS110 \| Transposase_20
CAZyme	HRGMv2_2189_1	HRGMv2_2189_1_2587	2869040	2870086	+	GH179

Gene ID: HRGMv2_2189_1_2578
Type: TC
Location: 2857475 - 2857747 (+)

Gene ID: HRGMv2_2189_1_2579
Type: pfam
Location: 2857760 - 2858356 (-)

Gene ID: HRGMv2_2189_1_2580
Type: STP
Location: 2858490 - 2860418 (+)

Gene ID: HRGMv2_2189_1_2581
Type: CAZyme
Location: 2860683 - 2861786 (+)

Gene ID: HRGMv2_2189_1_2582
Type: pfam
Location: 2861807 - 2862235 (+)

Gene ID: HRGMv2_2189_1_2583
Type: pfam
Location: 2862251 - 2863225 (+)

Gene ID: HRGMv2_2189_1_2584
Type: TC
Location: 2863242 - 2864624 (+)

Gene ID: HRGMv2_2189_1_2585
Type: CAZyme
Location: 2864789 - 2867215 (+)

Gene ID: HRGMv2_2189_1_2586
Type: pfam
Location: 2867561 - 2868736 (-)

Gene ID: HRGMv2_2189_1_2587
Type: CAZyme
Location: 2869040 - 2870086 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.