Cluster: HRGMv2_2189_CGC32
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2189
- CGC Family ID: CGCFAM_00099
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2189_1 | HRGMv2_2189_1_2490 | 2756350 | 2757726 | + | 4.A.1.2.5 |
| TF | HRGMv2_2189_1 | HRGMv2_2189_1_2491 | 2757826 | 2758686 | + | HTH_6 |
| CAZyme | HRGMv2_2189_1 | HRGMv2_2189_1_2492 | 2758700 | 2760133 | + | GH1 |
| TC | HRGMv2_2189_1 | HRGMv2_2189_1_2493 | 2760156 | 2760656 | + | 4.A.1.2.6 |
Gene ID: HRGMv2_2189_1_2490
Type: TC
Location: 2756350 - 2757726 (+)
Type: TC
Location: 2756350 - 2757726 (+)
Gene ID: HRGMv2_2189_1_2491
Type: TF
Location: 2757826 - 2758686 (+)
Type: TF
Location: 2757826 - 2758686 (+)
Gene ID: HRGMv2_2189_1_2492
Type: CAZyme
Location: 2758700 - 2760133 (+)
Type: CAZyme
Location: 2758700 - 2760133 (+)
Gene ID: HRGMv2_2189_1_2493
Type: TC
Location: 2760156 - 2760656 (+)
Type: TC
Location: 2760156 - 2760656 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.