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Cluster: HRGMv2_2189_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2189_1 HRGMv2_2189_1_2472 2733773 2734081 + 4.A.3.2.2
TC HRGMv2_2189_1 HRGMv2_2189_1_2473 2734125 2735438 + 4.A.3.2.2
pfam HRGMv2_2189_1 HRGMv2_2189_1_2474 2735481 2735798 + PTS_IIA
CAZyme HRGMv2_2189_1 HRGMv2_2189_1_2475 2735897 2737327 + GH1
pfam HRGMv2_2189_1 HRGMv2_2189_1_2476 2737525 2739255 + PDDEXK_9 | AAA-ATPase_like
TF HRGMv2_2189_1 HRGMv2_2189_1_2477 2739536 2740555 - HTH_AraC
TC HRGMv2_2189_1 HRGMv2_2189_1_2478 2740734 2742119 + 4.A.1.2.6
CAZyme HRGMv2_2189_1 HRGMv2_2189_1_2479 2742150 2744705 + GH106
CAZyme HRGMv2_2189_1 HRGMv2_2189_1_2480 2744744 2746183 + GH1
TC HRGMv2_2189_1 HRGMv2_2189_1_2481 2746186 2746686 + 4.A.1.2.6
Gene ID: HRGMv2_2189_1_2472
Type: TC
Location: 2733773 - 2734081 (+)
Gene ID: HRGMv2_2189_1_2473
Type: TC
Location: 2734125 - 2735438 (+)
Gene ID: HRGMv2_2189_1_2474
Type: pfam
Location: 2735481 - 2735798 (+)
Gene ID: HRGMv2_2189_1_2475
Type: CAZyme
Location: 2735897 - 2737327 (+)
Gene ID: HRGMv2_2189_1_2476
Type: pfam
Location: 2737525 - 2739255 (+)
Gene ID: HRGMv2_2189_1_2477
Type: TF
Location: 2739536 - 2740555 (-)
Gene ID: HRGMv2_2189_1_2478
Type: TC
Location: 2740734 - 2742119 (+)
Gene ID: HRGMv2_2189_1_2479
Type: CAZyme
Location: 2742150 - 2744705 (+)
Gene ID: HRGMv2_2189_1_2480
Type: CAZyme
Location: 2744744 - 2746183 (+)
Gene ID: HRGMv2_2189_1_2481
Type: TC
Location: 2746186 - 2746686 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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