dbCAN HGM

Cluster: HRGMv2_2189_CGC30

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2189_1	HRGMv2_2189_1_2445	2699403	2700668	+	3.A.1.1.47
TC	HRGMv2_2189_1	HRGMv2_2189_1_2446	2700883	2702184	+	3.A.1.1.47
TC	HRGMv2_2189_1	HRGMv2_2189_1_2447	2702218	2703186	+	3.A.1.1.47
TC	HRGMv2_2189_1	HRGMv2_2189_1_2448	2703205	2704059	+	3.A.1.1.47
CAZyme	HRGMv2_2189_1	HRGMv2_2189_1_2449	2704092	2705399	+	GH29
pfam	HRGMv2_2189_1	HRGMv2_2189_1_2450	2705422	2706684	+	GFO_IDH_MocA \| GFO_IDH_MocA_C \| GFO_IDH_MocA_C3
pfam	HRGMv2_2189_1	HRGMv2_2189_1_2451	2706748	2707860	+	APH
CAZyme	HRGMv2_2189_1	HRGMv2_2189_1_2452	2707876	2710107	+	GH36

Gene ID: HRGMv2_2189_1_2445
Type: TC
Location: 2699403 - 2700668 (+)

Gene ID: HRGMv2_2189_1_2446
Type: TC
Location: 2700883 - 2702184 (+)

Gene ID: HRGMv2_2189_1_2447
Type: TC
Location: 2702218 - 2703186 (+)

Gene ID: HRGMv2_2189_1_2448
Type: TC
Location: 2703205 - 2704059 (+)

Gene ID: HRGMv2_2189_1_2449
Type: CAZyme
Location: 2704092 - 2705399 (+)

Gene ID: HRGMv2_2189_1_2450
Type: pfam
Location: 2705422 - 2706684 (+)

Gene ID: HRGMv2_2189_1_2451
Type: pfam
Location: 2706748 - 2707860 (+)

Gene ID: HRGMv2_2189_1_2452
Type: CAZyme
Location: 2707876 - 2710107 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2189_1_2446	vegetarian > vegan	1.46972	0.04365
HRGMv2_2189_1_2450	vegetarian > vegan	2.51468	0.04365