Cluster: HRGMv2_2189_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2189
- CGC Family ID: CGCFAM_08989
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2189_1 | HRGMv2_2189_1_2247 | 2446548 | 2448464 | + | 4.A.1.2.1 |
| CAZyme | HRGMv2_2189_1 | HRGMv2_2189_1_2248 | 2448558 | 2449982 | + | GH32 |
| TC | HRGMv2_2189_1 | HRGMv2_2189_1_2249 | 2450274 | 2451854 | + | 4.A.1.1.8 |
| CAZyme | HRGMv2_2189_1 | HRGMv2_2189_1_2250 | 2451882 | 2453207 | + | GH4 |
Gene ID: HRGMv2_2189_1_2247
Type: TC
Location: 2446548 - 2448464 (+)
Type: TC
Location: 2446548 - 2448464 (+)
Gene ID: HRGMv2_2189_1_2248
Type: CAZyme
Location: 2448558 - 2449982 (+)
Type: CAZyme
Location: 2448558 - 2449982 (+)
Gene ID: HRGMv2_2189_1_2249
Type: TC
Location: 2450274 - 2451854 (+)
Type: TC
Location: 2450274 - 2451854 (+)
Gene ID: HRGMv2_2189_1_2250
Type: CAZyme
Location: 2451882 - 2453207 (+)
Type: CAZyme
Location: 2451882 - 2453207 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.