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Cluster: HRGMv2_2189_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2189_1 HRGMv2_2189_1_1997 2188386 2189135 - 9.B.158.1.1
sulfatase HRGMv2_2189_1 HRGMv2_2189_1_1998 2189444 2190169 - S1_9
CAZyme HRGMv2_2189_1 HRGMv2_2189_1_1999 2190291 2191415 - CE9
TC HRGMv2_2189_1 HRGMv2_2189_1_2000 2191760 2193280 + 2.A.21.2.5
pfam HRGMv2_2189_1 HRGMv2_2189_1_2001 2193359 2194612 - SLFN_AlbA_2 | HATPase_c_4
pfam HRGMv2_2189_1 HRGMv2_2189_1_2002 2194820 2195272 - HSP20 | ArsA_HSP20
TC HRGMv2_2189_1 HRGMv2_2189_1_2003 2195381 2196748 - 2.A.66.1.26
TC HRGMv2_2189_1 HRGMv2_2189_1_2004 2196993 2197769 - 2.A.5.5.2
Gene ID: HRGMv2_2189_1_1997
Type: TC
Location: 2188386 - 2189135 (-)
Gene ID: HRGMv2_2189_1_1998
Type: sulfatase
Location: 2189444 - 2190169 (-)
Gene ID: HRGMv2_2189_1_1999
Type: CAZyme
Location: 2190291 - 2191415 (-)
Gene ID: HRGMv2_2189_1_2000
Type: TC
Location: 2191760 - 2193280 (+)
Gene ID: HRGMv2_2189_1_2001
Type: pfam
Location: 2193359 - 2194612 (-)
Gene ID: HRGMv2_2189_1_2002
Type: pfam
Location: 2194820 - 2195272 (-)
Gene ID: HRGMv2_2189_1_2003
Type: TC
Location: 2195381 - 2196748 (-)
Gene ID: HRGMv2_2189_1_2004
Type: TC
Location: 2196993 - 2197769 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2189_1_2000 vegetarian > vegan 1.07421 0.04365
HRGMv2_2189_1_2003 vegan > omnivore 2.36232 0.01301

🧭 Explore Read Mapping of CGC

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