Cluster: HRGMv2_2189_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_2189
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2189_1 | HRGMv2_2189_1_1790 | 1955055 | 1960025 | - | GH84 |
| CAZyme | HRGMv2_2189_1 | HRGMv2_2189_1_1791 | 1960071 | 1965425 | - | CBM32 | GH2 |
| CAZyme | HRGMv2_2189_1 | HRGMv2_2189_1_1792 | 1965931 | 1972314 | - | CBM51 | GH110 |
| TC | HRGMv2_2189_1 | HRGMv2_2189_1_1793 | 1972665 | 1974041 | - | 2.A.2.1.1 |
| CAZyme | HRGMv2_2189_1 | HRGMv2_2189_1_1794 | 1974063 | 1976141 | - | GH36 |
| CAZyme | HRGMv2_2189_1 | HRGMv2_2189_1_1795 | 1976165 | 1978117 | - | GH42 |
Gene ID: HRGMv2_2189_1_1790
Type: CAZyme
Location: 1955055 - 1960025 (-)
Type: CAZyme
Location: 1955055 - 1960025 (-)
Gene ID: HRGMv2_2189_1_1791
Type: CAZyme
Location: 1960071 - 1965425 (-)
Type: CAZyme
Location: 1960071 - 1965425 (-)
Gene ID: HRGMv2_2189_1_1792
Type: CAZyme
Location: 1965931 - 1972314 (-)
Type: CAZyme
Location: 1965931 - 1972314 (-)
Gene ID: HRGMv2_2189_1_1793
Type: TC
Location: 1972665 - 1974041 (-)
Type: TC
Location: 1972665 - 1974041 (-)
Gene ID: HRGMv2_2189_1_1794
Type: CAZyme
Location: 1974063 - 1976141 (-)
Type: CAZyme
Location: 1974063 - 1976141 (-)
Gene ID: HRGMv2_2189_1_1795
Type: CAZyme
Location: 1976165 - 1978117 (-)
Type: CAZyme
Location: 1976165 - 1978117 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.