dbCAN HGM

Cluster: HRGMv2_2189_CGC18

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2189_1	HRGMv2_2189_1_1658	1794873	1796282	+	2.A.40.2.1
pfam	HRGMv2_2189_1	HRGMv2_2189_1_1659	1796429	1797133	-	Hydrolase \| Hydrolase_like \| HAD_2
NULL(UNKNOWN)	HRGMv2_2189_1	HRGMv2_2189_1_1660	1797433	1798215	+	NULL(UNKNOWN) [View Structural Homologs]
TC	HRGMv2_2189_1	HRGMv2_2189_1_1661	1798297	1799721	-	4.A.1.2.8
CAZyme	HRGMv2_2189_1	HRGMv2_2189_1_1662	1799760	1801943	-	GH36
TF	HRGMv2_2189_1	HRGMv2_2189_1_1663	1802106	1803017	+	HTH_AraC \| HTH_AraC
CAZyme	HRGMv2_2189_1	HRGMv2_2189_1_1664	1802926	1804617	-	GH13_31
TF	HRGMv2_2189_1	HRGMv2_2189_1_1665	1804736	1805611	+	HTH_AraC \| HTH_AraC
TC	HRGMv2_2189_1	HRGMv2_2189_1_1666	1805679	1806425	-	2.A.102.3.1

Gene ID: HRGMv2_2189_1_1658
Type: TC
Location: 1794873 - 1796282 (+)

Gene ID: HRGMv2_2189_1_1659
Type: pfam
Location: 1796429 - 1797133 (-)

Gene ID: HRGMv2_2189_1_1660
Type:
Location: 1797433 - 1798215 (+)

Gene ID: HRGMv2_2189_1_1661
Type: TC
Location: 1798297 - 1799721 (-)

Gene ID: HRGMv2_2189_1_1662
Type: CAZyme
Location: 1799760 - 1801943 (-)

Gene ID: HRGMv2_2189_1_1663
Type: TF
Location: 1802106 - 1803017 (+)

Gene ID: HRGMv2_2189_1_1664
Type: CAZyme
Location: 1802926 - 1804617 (-)

Gene ID: HRGMv2_2189_1_1665
Type: TF
Location: 1804736 - 1805611 (+)

Gene ID: HRGMv2_2189_1_1666
Type: TC
Location: 1805679 - 1806425 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.