dbCAN HGM

Cluster: HRGMv2_2189_CGC17

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2189_1	HRGMv2_2189_1_1623	1755327	1757912	-	3.A.9.1.2
CAZyme	HRGMv2_2189_1	HRGMv2_2189_1_1624	1758102	1759187	-	GH172
TC	HRGMv2_2189_1	HRGMv2_2189_1_1625	1759203	1760042	-	3.A.1.1.18
TC	HRGMv2_2189_1	HRGMv2_2189_1_1626	1760066	1760941	-	3.A.1.1.41
STP	HRGMv2_2189_1	HRGMv2_2189_1_1627	1760982	1762244	-	SBP_bac_1
TC	HRGMv2_2189_1	HRGMv2_2189_1_1628	1762438	1764237	+	8.A.59.2.1
TF	HRGMv2_2189_1	HRGMv2_2189_1_1629	1764237	1765823	+	HTH_AraC \| HTH_AraC
TC	HRGMv2_2189_1	HRGMv2_2189_1_1630	1765946	1766983	+	2.A.98.1.4

Gene ID: HRGMv2_2189_1_1623
Type: TC
Location: 1755327 - 1757912 (-)

Gene ID: HRGMv2_2189_1_1624
Type: CAZyme
Location: 1758102 - 1759187 (-)

Gene ID: HRGMv2_2189_1_1625
Type: TC
Location: 1759203 - 1760042 (-)

Gene ID: HRGMv2_2189_1_1626
Type: TC
Location: 1760066 - 1760941 (-)

Gene ID: HRGMv2_2189_1_1627
Type: STP
Location: 1760982 - 1762244 (-)

Gene ID: HRGMv2_2189_1_1628
Type: TC
Location: 1762438 - 1764237 (+)

Gene ID: HRGMv2_2189_1_1629
Type: TF
Location: 1764237 - 1765823 (+)

Gene ID: HRGMv2_2189_1_1630
Type: TC
Location: 1765946 - 1766983 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.