Cluster: HRGMv2_2189_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2189
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2189_1 | HRGMv2_2189_1_1564 | 1699739 | 1701448 | - | GH23 |
| NULL(UNKNOWN) | HRGMv2_2189_1 | HRGMv2_2189_1_1565 | 1701476 | 1701823 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2189_1 | HRGMv2_2189_1_1566 | 1701854 | 1702651 | - | DUF6674 |
| TC | HRGMv2_2189_1 | HRGMv2_2189_1_1567 | 1702720 | 1705050 | - | 3.A.7.7.1 |
Gene ID: HRGMv2_2189_1_1564
Type: CAZyme
Location: 1699739 - 1701448 (-)
Type: CAZyme
Location: 1699739 - 1701448 (-)
Gene ID: HRGMv2_2189_1_1565
Type:
Location: 1701476 - 1701823 (-)
Type:
Location: 1701476 - 1701823 (-)
Gene ID: HRGMv2_2189_1_1566
Type: pfam
Location: 1701854 - 1702651 (-)
Type: pfam
Location: 1701854 - 1702651 (-)
Gene ID: HRGMv2_2189_1_1567
Type: TC
Location: 1702720 - 1705050 (-)
Type: TC
Location: 1702720 - 1705050 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.