Cluster: HRGMv2_2189_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2189
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2189_1 | HRGMv2_2189_1_1430 | 1565511 | 1566338 | - | 3.A.1.5.20 |
| TC | HRGMv2_2189_1 | HRGMv2_2189_1_1431 | 1566349 | 1567335 | - | 3.A.1.5.20 |
| TC | HRGMv2_2189_1 | HRGMv2_2189_1_1432 | 1567316 | 1569004 | - | 3.A.1.5.21 |
| TC | HRGMv2_2189_1 | HRGMv2_2189_1_1433 | 1569001 | 1570575 | - | 3.A.1.5.28 |
| CAZyme | HRGMv2_2189_1 | HRGMv2_2189_1_1434 | 1570795 | 1575708 | - | GH95 |
| TC | HRGMv2_2189_1 | HRGMv2_2189_1_1435 | 1576264 | 1577661 | - | 2.A.25.1.9 |
Gene ID: HRGMv2_2189_1_1430
Type: TC
Location: 1565511 - 1566338 (-)
Type: TC
Location: 1565511 - 1566338 (-)
Gene ID: HRGMv2_2189_1_1431
Type: TC
Location: 1566349 - 1567335 (-)
Type: TC
Location: 1566349 - 1567335 (-)
Gene ID: HRGMv2_2189_1_1432
Type: TC
Location: 1567316 - 1569004 (-)
Type: TC
Location: 1567316 - 1569004 (-)
Gene ID: HRGMv2_2189_1_1433
Type: TC
Location: 1569001 - 1570575 (-)
Type: TC
Location: 1569001 - 1570575 (-)
Gene ID: HRGMv2_2189_1_1434
Type: CAZyme
Location: 1570795 - 1575708 (-)
Type: CAZyme
Location: 1570795 - 1575708 (-)
Gene ID: HRGMv2_2189_1_1435
Type: TC
Location: 1576264 - 1577661 (-)
Type: TC
Location: 1576264 - 1577661 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.