Cluster: HRGMv2_2189_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2189
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2189_1 | HRGMv2_2189_1_1239 | 1378424 | 1380199 | - | GH23 |
| peptidase | HRGMv2_2189_1 | HRGMv2_2189_1_1240 | 1380235 | 1381008 | - | C60.UPB |
| pfam | HRGMv2_2189_1 | HRGMv2_2189_1_1241 | 1381023 | 1381427 | - | DUF6075 |
| TC | HRGMv2_2189_1 | HRGMv2_2189_1_1242 | 1381443 | 1383776 | - | 3.A.7.7.1 |
Gene ID: HRGMv2_2189_1_1239
Type: CAZyme
Location: 1378424 - 1380199 (-)
Type: CAZyme
Location: 1378424 - 1380199 (-)
Gene ID: HRGMv2_2189_1_1240
Type: peptidase
Location: 1380235 - 1381008 (-)
Type: peptidase
Location: 1380235 - 1381008 (-)
Gene ID: HRGMv2_2189_1_1241
Type: pfam
Location: 1381023 - 1381427 (-)
Type: pfam
Location: 1381023 - 1381427 (-)
Gene ID: HRGMv2_2189_1_1242
Type: TC
Location: 1381443 - 1383776 (-)
Type: TC
Location: 1381443 - 1383776 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.