Cluster: HRGMv2_2189_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2189
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2189_1 | HRGMv2_2189_1_1082 | 1204485 | 1206932 | - | GH3 |
| TC | HRGMv2_2189_1 | HRGMv2_2189_1_1083 | 1207229 | 1208680 | + | 2.A.21.2.5 |
| TC | HRGMv2_2189_1 | HRGMv2_2189_1_1084 | 1208867 | 1210219 | - | 2.A.66.1.23 |
| TC | HRGMv2_2189_1 | HRGMv2_2189_1_1085 | 1210421 | 1212124 | - | 2.A.114.1.3 |
Gene ID: HRGMv2_2189_1_1082
Type: CAZyme
Location: 1204485 - 1206932 (-)
Type: CAZyme
Location: 1204485 - 1206932 (-)
Gene ID: HRGMv2_2189_1_1083
Type: TC
Location: 1207229 - 1208680 (+)
Type: TC
Location: 1207229 - 1208680 (+)
Gene ID: HRGMv2_2189_1_1084
Type: TC
Location: 1208867 - 1210219 (-)
Type: TC
Location: 1208867 - 1210219 (-)
Gene ID: HRGMv2_2189_1_1085
Type: TC
Location: 1210421 - 1212124 (-)
Type: TC
Location: 1210421 - 1212124 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.