dbCAN HGM

Cluster: HRGMv2_2182_CGC9

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2182_1	HRGMv2_2182_1_777	912430	913164	+	9.B.18.1.3
CAZyme	HRGMv2_2182_1	HRGMv2_2182_1_778	913218	914312	+	GT2
TC	HRGMv2_2182_1	HRGMv2_2182_1_779	914315	916183	+	9.B.18.2.1
CAZyme	HRGMv2_2182_1	HRGMv2_2182_1_780	916237	917331	+	GT4
CAZyme	HRGMv2_2182_1	HRGMv2_2182_1_781	917371	918459	+	GT4
pfam	HRGMv2_2182_1	HRGMv2_2182_1_782	918462	919382	+	3Beta_HSD \| Epimerase \| Polysacc_synt_2 \| RmlD_sub_bind \| NAD_binding_4 \| GDP_Man_Dehyd
CAZyme	HRGMv2_2182_1	HRGMv2_2182_1_783	919404	920597	+	GT76
NULL(UNKNOWN)	HRGMv2_2182_1	HRGMv2_2182_1_784	920636	921544	+	NULL(UNKNOWN) [View Structural Homologs]
CAZyme	HRGMv2_2182_1	HRGMv2_2182_1_785	922188	922928	+	GT2
TC	HRGMv2_2182_1	HRGMv2_2182_1_786	923155	923637	+	9.A.24.1.7
NULL(UNKNOWN)	HRGMv2_2182_1	HRGMv2_2182_1_787	923915	925042	+	NULL(UNKNOWN) [View Structural Homologs]
TC	HRGMv2_2182_1	HRGMv2_2182_1_788	925067	926638	+	2.A.50.2.1

Gene ID: HRGMv2_2182_1_777
Type: TC
Location: 912430 - 913164 (+)

Gene ID: HRGMv2_2182_1_778
Type: CAZyme
Location: 913218 - 914312 (+)

Gene ID: HRGMv2_2182_1_779
Type: TC
Location: 914315 - 916183 (+)

Gene ID: HRGMv2_2182_1_780
Type: CAZyme
Location: 916237 - 917331 (+)

Gene ID: HRGMv2_2182_1_781
Type: CAZyme
Location: 917371 - 918459 (+)

Gene ID: HRGMv2_2182_1_782
Type: pfam
Location: 918462 - 919382 (+)

Gene ID: HRGMv2_2182_1_783
Type: CAZyme
Location: 919404 - 920597 (+)

Gene ID: HRGMv2_2182_1_784
Type:
Location: 920636 - 921544 (+)

Gene ID: HRGMv2_2182_1_785
Type: CAZyme
Location: 922188 - 922928 (+)

Gene ID: HRGMv2_2182_1_786
Type: TC
Location: 923155 - 923637 (+)

Gene ID: HRGMv2_2182_1_787
Type:
Location: 923915 - 925042 (+)

Gene ID: HRGMv2_2182_1_788
Type: TC
Location: 925067 - 926638 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2182_1_787	vegan > omnivore	1.41067	0.00565

Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2182_1_785	flexitarian > omnivore	2.18931	0.04839
HRGMv2_2182_1_785	vegan > omnivore	1.42728	0.00114
HRGMv2_2182_1_787	vegan > omnivore	3.62590	0.00114