Cluster: HRGMv2_2182_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2182
- CGC Family ID: CGCFAM_01037
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2182_1 | HRGMv2_2182_1_744 | 859322 | 864628 | + | PL9_1 |
| STP | HRGMv2_2182_1 | HRGMv2_2182_1_745 | 864808 | 865443 | - | TetR_N |
| pfam | HRGMv2_2182_1 | HRGMv2_2182_1_746 | 865843 | 867930 | + | ACR_tran | MMPL | MMPL |
| TC | HRGMv2_2182_1 | HRGMv2_2182_1_747 | 868017 | 870434 | + | 9.B.74.1.4 |
Gene ID: HRGMv2_2182_1_744
Type: CAZyme
Location: 859322 - 864628 (+)
Type: CAZyme
Location: 859322 - 864628 (+)
Gene ID: HRGMv2_2182_1_745
Type: STP
Location: 864808 - 865443 (-)
Type: STP
Location: 864808 - 865443 (-)
Gene ID: HRGMv2_2182_1_746
Type: pfam
Location: 865843 - 867930 (+)
Type: pfam
Location: 865843 - 867930 (+)
Gene ID: HRGMv2_2182_1_747
Type: TC
Location: 868017 - 870434 (+)
Type: TC
Location: 868017 - 870434 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp000436535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.