dbCAN HGM

Cluster: HRGMv2_2182_CGC5

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_2182_1	HRGMv2_2182_1_593	652425	653519	+	GH25
pfam	HRGMv2_2182_1	HRGMv2_2182_1_594	653546	654064	-	Gate
TC	HRGMv2_2182_1	HRGMv2_2182_1_595	654084	654662	-	9.B.156.3.1
STP	HRGMv2_2182_1	HRGMv2_2182_1_596	654708	655634	-	NUDIX
pfam	HRGMv2_2182_1	HRGMv2_2182_1_597	655636	656586	-	cobW \| DUF1980_C
TC	HRGMv2_2182_1	HRGMv2_2182_1_598	656805	658037	-	9.B.10.1.1

Gene ID: HRGMv2_2182_1_593
Type: CAZyme
Location: 652425 - 653519 (+)

Gene ID: HRGMv2_2182_1_594
Type: pfam
Location: 653546 - 654064 (-)

Gene ID: HRGMv2_2182_1_595
Type: TC
Location: 654084 - 654662 (-)

Gene ID: HRGMv2_2182_1_596
Type: STP
Location: 654708 - 655634 (-)

Gene ID: HRGMv2_2182_1_597
Type: pfam
Location: 655636 - 656586 (-)

Gene ID: HRGMv2_2182_1_598
Type: TC
Location: 656805 - 658037 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2182_1_593	vegan > omnivore	3.22366	0.00565
HRGMv2_2182_1_593	vegetarian > omnivore	2.07834	0.02312
HRGMv2_2182_1_594	vegan > omnivore	3.66798	0.00565
HRGMv2_2182_1_594	vegetarian > omnivore	3.23226	0.02312
HRGMv2_2182_1_595	vegan > omnivore	2.05393	0.00565
HRGMv2_2182_1_596	vegan > omnivore	1.98664	0.00565
HRGMv2_2182_1_596	vegetarian > omnivore	1.80946	0.02312

Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2182_1_596	vegan > omnivore	1.65885	0.00114