Cluster: HRGMv2_2182_CGC31
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2182
- CGC Family ID: CGCFAM_00005
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2182_5 | HRGMv2_2182_5_2 | 718 | 1812 | - | GT4 |
| TC | HRGMv2_2182_5 | HRGMv2_2182_5_3 | 1866 | 3734 | - | 9.B.18.2.1 |
| CAZyme | HRGMv2_2182_5 | HRGMv2_2182_5_4 | 3737 | 4831 | - | GT2 |
| TC | HRGMv2_2182_5 | HRGMv2_2182_5_5 | 4885 | 5619 | - | 9.B.18.1.3 |
Gene ID: HRGMv2_2182_5_2
Type: CAZyme
Location: 718 - 1812 (-)
Type: CAZyme
Location: 718 - 1812 (-)
Gene ID: HRGMv2_2182_5_3
Type: TC
Location: 1866 - 3734 (-)
Type: TC
Location: 1866 - 3734 (-)
Gene ID: HRGMv2_2182_5_4
Type: CAZyme
Location: 3737 - 4831 (-)
Type: CAZyme
Location: 3737 - 4831 (-)
Gene ID: HRGMv2_2182_5_5
Type: TC
Location: 4885 - 5619 (-)
Type: TC
Location: 4885 - 5619 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp000436535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.