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Cluster: HRGMv2_2182_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2182_2 HRGMv2_2182_2_445 502905 503885 - GT2
pfam HRGMv2_2182_2 HRGMv2_2182_2_446 503931 505004 - EpsG
pfam HRGMv2_2182_2 HRGMv2_2182_2_447 505001 505822 - Glycos_transf_2
CAZyme HRGMv2_2182_2 HRGMv2_2182_2_448 505819 506907 - GT4
TF HRGMv2_2182_2 HRGMv2_2182_2_449 506919 507245 - HTH_3
pfam HRGMv2_2182_2 HRGMv2_2182_2_450 507893 508855 - Phage_integrase
TC HRGMv2_2182_2 HRGMv2_2182_2_451 509124 510902 - 9.B.74.1.1
NULL(UNKNOWN) HRGMv2_2182_2 HRGMv2_2182_2_452 510902 511594 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2182_2 HRGMv2_2182_2_453 511741 513933 - 9.B.74.1.1
Gene ID: HRGMv2_2182_2_445
Type: CAZyme
Location: 502905 - 503885 (-)
Gene ID: HRGMv2_2182_2_446
Type: pfam
Location: 503931 - 505004 (-)
Gene ID: HRGMv2_2182_2_447
Type: pfam
Location: 505001 - 505822 (-)
Gene ID: HRGMv2_2182_2_448
Type: CAZyme
Location: 505819 - 506907 (-)
Gene ID: HRGMv2_2182_2_449
Type: TF
Location: 506919 - 507245 (-)
Gene ID: HRGMv2_2182_2_450
Type: pfam
Location: 507893 - 508855 (-)
Gene ID: HRGMv2_2182_2_451
Type: TC
Location: 509124 - 510902 (-)
Gene ID: HRGMv2_2182_2_452
Type:
Location: 510902 - 511594 (-)
Gene ID: HRGMv2_2182_2_453
Type: TC
Location: 511741 - 513933 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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