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Cluster: HRGMv2_2182_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2182_2 HRGMv2_2182_2_379 431531 432814 + GH25
STP HRGMv2_2182_2 HRGMv2_2182_2_380 433013 434029 + Peripla_BP_2
pfam HRGMv2_2182_2 HRGMv2_2182_2_381 434054 435430 + TP_methylase | NAD_binding_7
TC HRGMv2_2182_2 HRGMv2_2182_2_382 435670 436698 + 3.A.1.6.1
TC HRGMv2_2182_2 HRGMv2_2182_2_383 436679 437560 + 3.A.1.6.1
TC HRGMv2_2182_2 HRGMv2_2182_2_384 437627 438496 + 3.A.1.6.1
TC HRGMv2_2182_2 HRGMv2_2182_2_385 438496 439557 + 3.A.1.6.3
Gene ID: HRGMv2_2182_2_379
Type: CAZyme
Location: 431531 - 432814 (+)
Gene ID: HRGMv2_2182_2_380
Type: STP
Location: 433013 - 434029 (+)
Gene ID: HRGMv2_2182_2_381
Type: pfam
Location: 434054 - 435430 (+)
Gene ID: HRGMv2_2182_2_382
Type: TC
Location: 435670 - 436698 (+)
Gene ID: HRGMv2_2182_2_383
Type: TC
Location: 436679 - 437560 (+)
Gene ID: HRGMv2_2182_2_384
Type: TC
Location: 437627 - 438496 (+)
Gene ID: HRGMv2_2182_2_385
Type: TC
Location: 438496 - 439557 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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