Cluster: HRGMv2_2182_CGC27
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2182
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2182_2 | HRGMv2_2182_2_265 | 287585 | 288874 | + | GT4 |
| TC | HRGMv2_2182_2 | HRGMv2_2182_2_266 | 288974 | 289765 | + | 3.A.1.103.4 |
| TC | HRGMv2_2182_2 | HRGMv2_2182_2_267 | 289832 | 291139 | + | 3.A.1.103.4 |
Gene ID: HRGMv2_2182_2_265
Type: CAZyme
Location: 287585 - 288874 (+)
Type: CAZyme
Location: 287585 - 288874 (+)
Gene ID: HRGMv2_2182_2_266
Type: TC
Location: 288974 - 289765 (+)
Type: TC
Location: 288974 - 289765 (+)
Gene ID: HRGMv2_2182_2_267
Type: TC
Location: 289832 - 291139 (+)
Type: TC
Location: 289832 - 291139 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp000436535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.