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Cluster: HRGMv2_2182_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2182_1 HRGMv2_2182_1_1899 2241742 2243037 + GT2
pfam HRGMv2_2182_1 HRGMv2_2182_1_1900 2243127 2243819 - Lactamase_B
NULL(UNKNOWN) HRGMv2_2182_1 HRGMv2_2182_1_1901 2243819 2244055 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2182_1 HRGMv2_2182_1_1902 2244179 2244685 - 2.A.87.3.3
pfam HRGMv2_2182_1 HRGMv2_2182_1_1903 2244826 2245215 - NusG_II
peptidase HRGMv2_2182_1 HRGMv2_2182_1_1904 2245569 2246903 - M20.UPD
TC HRGMv2_2182_1 HRGMv2_2182_1_1905 2246936 2248333 - 2.A.118.1.3
Gene ID: HRGMv2_2182_1_1899
Type: CAZyme
Location: 2241742 - 2243037 (+)
Gene ID: HRGMv2_2182_1_1900
Type: pfam
Location: 2243127 - 2243819 (-)
Gene ID: HRGMv2_2182_1_1901
Type:
Location: 2243819 - 2244055 (-)
Gene ID: HRGMv2_2182_1_1902
Type: TC
Location: 2244179 - 2244685 (-)
Gene ID: HRGMv2_2182_1_1903
Type: pfam
Location: 2244826 - 2245215 (-)
Gene ID: HRGMv2_2182_1_1904
Type: peptidase
Location: 2245569 - 2246903 (-)
Gene ID: HRGMv2_2182_1_1905
Type: TC
Location: 2246936 - 2248333 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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