Cluster: HRGMv2_2182_CGC19
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2182
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2182_1 | HRGMv2_2182_1_1633 | 1958595 | 1959542 | - | CE8 |
| pfam | HRGMv2_2182_1 | HRGMv2_2182_1_1634 | 1959937 | 1960380 | + | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| TC | HRGMv2_2182_1 | HRGMv2_2182_1_1635 | 1960398 | 1961042 | + | 3.A.1.25.3 |
Gene ID: HRGMv2_2182_1_1633
Type: CAZyme
Location: 1958595 - 1959542 (-)
Type: CAZyme
Location: 1958595 - 1959542 (-)
Gene ID: HRGMv2_2182_1_1634
Type: pfam
Location: 1959937 - 1960380 (+)
Type: pfam
Location: 1959937 - 1960380 (+)
Gene ID: HRGMv2_2182_1_1635
Type: TC
Location: 1960398 - 1961042 (+)
Type: TC
Location: 1960398 - 1961042 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp000436535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.