dbCAN HGM

Cluster: HRGMv2_2182_CGC16

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2182_1	HRGMv2_2182_1_1233	1446709	1447425	+	9.B.18.1.2
CAZyme	HRGMv2_2182_1	HRGMv2_2182_1_1234	1447437	1448201	+	GT111
CAZyme	HRGMv2_2182_1	HRGMv2_2182_1_1235	1448350	1449459	+	GT4
CAZyme	HRGMv2_2182_1	HRGMv2_2182_1_1236	1449511	1450560	+	GT113
NULL(UNKNOWN)	HRGMv2_2182_1	HRGMv2_2182_1_1237	1450706	1451962	+	NULL(UNKNOWN) [View Structural Homologs]
TC	HRGMv2_2182_1	HRGMv2_2182_1_1238	1451964	1453418	+	2.A.66.2.16
pfam	HRGMv2_2182_1	HRGMv2_2182_1_1239	1453481	1454596	+	Amino_oxidase \| GLF \| NAD_binding_8
CAZyme	HRGMv2_2182_1	HRGMv2_2182_1_1240	1454800	1455801	+	GT2
pfam	HRGMv2_2182_1	HRGMv2_2182_1_1241	1455847	1456935	+	Acyl_transf_3
CAZyme	HRGMv2_2182_1	HRGMv2_2182_1_1242	1457212	1459440	+	GH25

Gene ID: HRGMv2_2182_1_1233
Type: TC
Location: 1446709 - 1447425 (+)

Gene ID: HRGMv2_2182_1_1234
Type: CAZyme
Location: 1447437 - 1448201 (+)

Gene ID: HRGMv2_2182_1_1235
Type: CAZyme
Location: 1448350 - 1449459 (+)

Gene ID: HRGMv2_2182_1_1236
Type: CAZyme
Location: 1449511 - 1450560 (+)

Gene ID: HRGMv2_2182_1_1237
Type:
Location: 1450706 - 1451962 (+)

Gene ID: HRGMv2_2182_1_1238
Type: TC
Location: 1451964 - 1453418 (+)

Gene ID: HRGMv2_2182_1_1239
Type: pfam
Location: 1453481 - 1454596 (+)

Gene ID: HRGMv2_2182_1_1240
Type: CAZyme
Location: 1454800 - 1455801 (+)

Gene ID: HRGMv2_2182_1_1241
Type: pfam
Location: 1455847 - 1456935 (+)

Gene ID: HRGMv2_2182_1_1242
Type: CAZyme
Location: 1457212 - 1459440 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.