Cluster: HRGMv2_2182_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2182
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2182_1 | HRGMv2_2182_1_980 | 1142141 | 1143802 | + | GH33 |
| pfam | HRGMv2_2182_1 | HRGMv2_2182_1_981 | 1143961 | 1144401 | - | HSP20 |
| TC | HRGMv2_2182_1 | HRGMv2_2182_1_982 | 1144640 | 1145851 | - | 2.A.23.2.7 |
Gene ID: HRGMv2_2182_1_980
Type: CAZyme
Location: 1142141 - 1143802 (+)
Type: CAZyme
Location: 1142141 - 1143802 (+)
Gene ID: HRGMv2_2182_1_981
Type: pfam
Location: 1143961 - 1144401 (-)
Type: pfam
Location: 1143961 - 1144401 (-)
Gene ID: HRGMv2_2182_1_982
Type: TC
Location: 1144640 - 1145851 (-)
Type: TC
Location: 1144640 - 1145851 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp000436535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.