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Cluster: HRGMv2_2157_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2157_127 HRGMv2_2157_127_17 22061 24508 - GT2 | GT2
CAZyme HRGMv2_2157_127 HRGMv2_2157_127_18 24505 27012 - GT2 | GT2
NULL(UNKNOWN) HRGMv2_2157_127 HRGMv2_2157_127_19 27017 27907 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2157_127 HRGMv2_2157_127_20 27907 28833 - RrnaAD | PCMT | MTS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
TC HRGMv2_2157_127 HRGMv2_2157_127_21 28846 30117 - 3.A.1.103.6
TC HRGMv2_2157_127 HRGMv2_2157_127_22 30130 30945 - 3.A.1.104.1
pfam HRGMv2_2157_127 HRGMv2_2157_127_23 30955 31509 - dTDP_sugar_isom
STP HRGMv2_2157_127 HRGMv2_2157_127_24 31523 32653 - Aminotran_1_2
CAZyme HRGMv2_2157_127 HRGMv2_2157_127_25 32671 34209 - GH25
Gene ID: HRGMv2_2157_127_17
Type: CAZyme
Location: 22061 - 24508 (-)
Gene ID: HRGMv2_2157_127_18
Type: CAZyme
Location: 24505 - 27012 (-)
Gene ID: HRGMv2_2157_127_19
Type:
Location: 27017 - 27907 (-)
Gene ID: HRGMv2_2157_127_20
Type: pfam
Location: 27907 - 28833 (-)
Gene ID: HRGMv2_2157_127_21
Type: TC
Location: 28846 - 30117 (-)
Gene ID: HRGMv2_2157_127_22
Type: TC
Location: 30130 - 30945 (-)
Gene ID: HRGMv2_2157_127_23
Type: pfam
Location: 30955 - 31509 (-)
Gene ID: HRGMv2_2157_127_24
Type: STP
Location: 31523 - 32653 (-)
Gene ID: HRGMv2_2157_127_25
Type: CAZyme
Location: 32671 - 34209 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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