PROTEIN: HRGMv2_2157_127_19
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Protein File & Metadata
Source:
HRGMv2_2157_127_19.pdb
Genome ID:
Protein ID:
HRGMv2_2157_127_19
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Protein Sequence
MEKLIYSKYS NERSPRFSLR TDILEQEDIK IVRKTPVGKE GEAHVASLAK WAEALEKAFK 60 DSPFVCNKCA LEGKSAVLEY VSGETLEERL DSLLKQGEKE EAETLLTGYL AELEKIYKGR 120 IFKNTEAFTK VFGETVFFQE MECADVTDID MVCQNLVLTN PPVVLDYEWT FDFPVPGKFV 180 LYRVIHYYIH SNPMREVLDE EKIYRKFGIT PCVRSQFEKM EVSFQKYITE GHIPMRDMFT 240 AMSPGAMWIQ EKYAQLQAEN RELKEEIRKK NHLIREMRNT KIWKMYRKYR KMVERK 296
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0R0FJF0-F1-model_v4 | 1 | 223 | 16 | 233 | 0.5555 |
0.6856 |
| AF-B5WWL2-F1-model_v4 | 1 | 222 | 18 | 242 | 0.5449 |
0.6719 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q9AGZ0-F1-model_v4 | GT2 | 2 | 250 | 1 | 244 | 0.5359 |
0.8754 |
| AF-D9R088-F1-model_v4 | GT2 , GT4 | 1 | 259 | 1 | 744 | 0.4915 |
0.8722 |
| A0A239QLG0 | GT2 | 1 | 256 | 1 | 270 | 0.4834 |
0.851 |
| A0A829WPC6 | GT2 , GT4 | 1 | 266 | 262 | 528 | 0.4736 |
0.8615 |
| A0A4P9E9V2 | GT2 , GT4 | 1 | 283 | 300 | 640 | 0.4635 |
0.8432 |
| QWT52131.1 | GT2 | 1 | 263 | 1 | 441 | 0.4552 |
0.7992 |
| C6LFR9 | GT2 , GT4 | 1 | 260 | 300 | 1288 | 0.4544 |
0.8978 |
| A0A2T4T973 | GT2 , GT4 | 1 | 296 | 261 | 827 | 0.4499 |
0.7358 |
| AF-A0A385Q4F2-F1-model_v4 | GT2 , GT4 | 1 | 266 | 232 | 468 | 0.4154 |
0.8308 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A239QLG0 | GT2 | 1 | 256 | 1 | 270 | 0.4834 |
0.851 |
| A0A829WPC6 | GT2 , GT4 | 1 | 266 | 262 | 528 | 0.4736 |
0.8615 |
| A0A4P9E9V2 | GT2 , GT4 | 1 | 283 | 300 | 640 | 0.4635 |
0.8432 |
| QWT52131.1 | GT2 | 1 | 263 | 1 | 441 | 0.4552 |
0.7992 |
| C6LFR9 | GT2 , GT4 | 1 | 260 | 300 | 1288 | 0.4544 |
0.8978 |
| A0A2T4T973 | GT2 , GT4 | 1 | 296 | 261 | 827 | 0.4499 |
0.7358 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.