Cluster: HRGMv2_2140_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2140
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2140_2 | HRGMv2_2140_2_129 | 150882 | 151862 | + | 3.A.1.2.21 |
| pfam | HRGMv2_2140_2 | HRGMv2_2140_2_130 | 151908 | 152987 | + | Peripla_BP_4 |
| TC | HRGMv2_2140_2 | HRGMv2_2140_2_131 | 153069 | 154586 | + | 3.A.1.2.19 |
| pfam | HRGMv2_2140_2 | HRGMv2_2140_2_132 | 154630 | 155898 | + | URO-D |
| CAZyme | HRGMv2_2140_2 | HRGMv2_2140_2_133 | 156102 | 162299 | + | CBM6 |
Gene ID: HRGMv2_2140_2_129
Type: TC
Location: 150882 - 151862 (+)
Type: TC
Location: 150882 - 151862 (+)
Gene ID: HRGMv2_2140_2_130
Type: pfam
Location: 151908 - 152987 (+)
Type: pfam
Location: 151908 - 152987 (+)
Gene ID: HRGMv2_2140_2_131
Type: TC
Location: 153069 - 154586 (+)
Type: TC
Location: 153069 - 154586 (+)
Gene ID: HRGMv2_2140_2_132
Type: pfam
Location: 154630 - 155898 (+)
Type: pfam
Location: 154630 - 155898 (+)
Gene ID: HRGMv2_2140_2_133
Type: CAZyme
Location: 156102 - 162299 (+)
Type: CAZyme
Location: 156102 - 162299 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lactonifactor
Species
Lactonifactor sp009677585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.