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Cluster: HRGMv2_2140_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2140_2 HRGMv2_2140_2_82 92288 93976 + 2.A.39.5.1
pfam HRGMv2_2140_2 HRGMv2_2140_2_83 94203 95213 + Peripla_BP_4
TC HRGMv2_2140_2 HRGMv2_2140_2_84 95229 96716 + 8.A.59.2.1
TF HRGMv2_2140_2 HRGMv2_2140_2_85 96738 98333 + HTH_AraC | HTH_AraC
TC HRGMv2_2140_2 HRGMv2_2140_2_86 98333 99373 + 3.A.1.2.26
TC HRGMv2_2140_2 HRGMv2_2140_2_87 99529 100686 + 3.A.1.2.5
TC HRGMv2_2140_2 HRGMv2_2140_2_88 100753 102291 + 3.A.1.2.5
TC HRGMv2_2140_2 HRGMv2_2140_2_89 102295 103455 + 3.A.1.2.5
CAZyme HRGMv2_2140_2 HRGMv2_2140_2_90 103586 108301 + CBM66 | GH43_35
CAZyme HRGMv2_2140_2 HRGMv2_2140_2_91 108603 112220 + CBM6 | CBM6 | GH43_29
Gene ID: HRGMv2_2140_2_82
Type: TC
Location: 92288 - 93976 (+)
Gene ID: HRGMv2_2140_2_83
Type: pfam
Location: 94203 - 95213 (+)
Gene ID: HRGMv2_2140_2_84
Type: TC
Location: 95229 - 96716 (+)
Gene ID: HRGMv2_2140_2_85
Type: TF
Location: 96738 - 98333 (+)
Gene ID: HRGMv2_2140_2_86
Type: TC
Location: 98333 - 99373 (+)
Gene ID: HRGMv2_2140_2_87
Type: TC
Location: 99529 - 100686 (+)
Gene ID: HRGMv2_2140_2_88
Type: TC
Location: 100753 - 102291 (+)
Gene ID: HRGMv2_2140_2_89
Type: TC
Location: 102295 - 103455 (+)
Gene ID: HRGMv2_2140_2_90
Type: CAZyme
Location: 103586 - 108301 (+)
Gene ID: HRGMv2_2140_2_91
Type: CAZyme
Location: 108603 - 112220 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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