Cluster: HRGMv2_2140_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2140
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2140_16 | HRGMv2_2140_16_3 | 1081 | 2052 | + | 9.B.146.1.3 |
| NULL(UNKNOWN) | HRGMv2_2140_16 | HRGMv2_2140_16_4 | 2297 | 3646 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2140_16 | HRGMv2_2140_16_5 | 3673 | 6162 | + | WG_beta_rep | WG_beta_rep | WG_beta_rep | WG_beta_rep | WG_beta_rep | WG_beta_rep | WG_beta_rep | WG_beta_rep | WG_beta_rep | WG_beta_rep | WG_beta_rep | WG_beta_rep |
| TC | HRGMv2_2140_16 | HRGMv2_2140_16_6 | 6146 | 8080 | + | 3.A.16.1.1 |
| CAZyme | HRGMv2_2140_16 | HRGMv2_2140_16_7 | 8158 | 9432 | - | GH18 |
Gene ID: HRGMv2_2140_16_3
Type: TC
Location: 1081 - 2052 (+)
Type: TC
Location: 1081 - 2052 (+)
Gene ID: HRGMv2_2140_16_4
Type:
Location: 2297 - 3646 (+)
Type:
Location: 2297 - 3646 (+)
Gene ID: HRGMv2_2140_16_5
Type: pfam
Location: 3673 - 6162 (+)
Type: pfam
Location: 3673 - 6162 (+)
Gene ID: HRGMv2_2140_16_6
Type: TC
Location: 6146 - 8080 (+)
Type: TC
Location: 6146 - 8080 (+)
Gene ID: HRGMv2_2140_16_7
Type: CAZyme
Location: 8158 - 9432 (-)
Type: CAZyme
Location: 8158 - 9432 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lactonifactor
Species
Lactonifactor sp009677585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.