Cluster: HRGMv2_2140_CGC3
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2140
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2140_1 | HRGMv2_2140_1_76 | 91930 | 92700 | - | 3.A.1.5.15 |
| TC | HRGMv2_2140_1 | HRGMv2_2140_1_77 | 92691 | 93662 | - | 3.A.1.5.29 |
| TC | HRGMv2_2140_1 | HRGMv2_2140_1_78 | 93673 | 94530 | - | 3.A.1.5.38 |
| TC | HRGMv2_2140_1 | HRGMv2_2140_1_79 | 94527 | 95477 | - | 3.A.1.5.19 |
| TC | HRGMv2_2140_1 | HRGMv2_2140_1_80 | 95538 | 97160 | - | 3.A.1.5.20 |
| pfam | HRGMv2_2140_1 | HRGMv2_2140_1_81 | 97203 | 97865 | - | Ubie_methyltran | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| TC | HRGMv2_2140_1 | HRGMv2_2140_1_82 | 98136 | 99104 | - | 3.A.1.2.1 |
| TC | HRGMv2_2140_1 | HRGMv2_2140_1_83 | 99130 | 100617 | - | 3.A.1.2.20 |
| TC | HRGMv2_2140_1 | HRGMv2_2140_1_84 | 100713 | 101846 | - | 3.A.1.2.6 |
| pfam | HRGMv2_2140_1 | HRGMv2_2140_1_85 | 101895 | 102845 | - | PTE |
| pfam | HRGMv2_2140_1 | HRGMv2_2140_1_86 | 103310 | 103594 | - | Trns_repr_metal |
| CAZyme | HRGMv2_2140_1 | HRGMv2_2140_1_87 | 103814 | 110737 | - | GH43_26 | GH43_27 |
Gene ID: HRGMv2_2140_1_76
Type: TC
Location: 91930 - 92700 (-)
Type: TC
Location: 91930 - 92700 (-)
Gene ID: HRGMv2_2140_1_77
Type: TC
Location: 92691 - 93662 (-)
Type: TC
Location: 92691 - 93662 (-)
Gene ID: HRGMv2_2140_1_78
Type: TC
Location: 93673 - 94530 (-)
Type: TC
Location: 93673 - 94530 (-)
Gene ID: HRGMv2_2140_1_79
Type: TC
Location: 94527 - 95477 (-)
Type: TC
Location: 94527 - 95477 (-)
Gene ID: HRGMv2_2140_1_80
Type: TC
Location: 95538 - 97160 (-)
Type: TC
Location: 95538 - 97160 (-)
Gene ID: HRGMv2_2140_1_81
Type: pfam
Location: 97203 - 97865 (-)
Type: pfam
Location: 97203 - 97865 (-)
Gene ID: HRGMv2_2140_1_82
Type: TC
Location: 98136 - 99104 (-)
Type: TC
Location: 98136 - 99104 (-)
Gene ID: HRGMv2_2140_1_83
Type: TC
Location: 99130 - 100617 (-)
Type: TC
Location: 99130 - 100617 (-)
Gene ID: HRGMv2_2140_1_84
Type: TC
Location: 100713 - 101846 (-)
Type: TC
Location: 100713 - 101846 (-)
Gene ID: HRGMv2_2140_1_85
Type: pfam
Location: 101895 - 102845 (-)
Type: pfam
Location: 101895 - 102845 (-)
Gene ID: HRGMv2_2140_1_86
Type: pfam
Location: 103310 - 103594 (-)
Type: pfam
Location: 103310 - 103594 (-)
Gene ID: HRGMv2_2140_1_87
Type: CAZyme
Location: 103814 - 110737 (-)
Type: CAZyme
Location: 103814 - 110737 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lactonifactor
Species
Lactonifactor sp009677585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.