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Cluster: HRGMv2_2140_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2140_10 HRGMv2_2140_10_92 90013 91371 - 2.A.66.1.32
TF HRGMv2_2140_10 HRGMv2_2140_10_93 91368 91817 - 0040517
TC HRGMv2_2140_10 HRGMv2_2140_10_94 91904 92767 - 2.A.115.1.1
NULL(UNKNOWN) HRGMv2_2140_10 HRGMv2_2140_10_95 93088 93552 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2140_10 HRGMv2_2140_10_96 93549 95708 + 9.B.74.1.1
CAZyme HRGMv2_2140_10 HRGMv2_2140_10_97 95733 97874 + GH13_11
pfam HRGMv2_2140_10 HRGMv2_2140_10_98 97860 98822 - ACP_syn_III_C | ACP_syn_III
pfam HRGMv2_2140_10 HRGMv2_2140_10_99 98902 99474 - DUF5662
CAZyme HRGMv2_2140_10 HRGMv2_2140_10_100 99490 101367 - GH13_11
TC HRGMv2_2140_10 HRGMv2_2140_10_101 101394 102953 - 2.A.49.5.5
Gene ID: HRGMv2_2140_10_92
Type: TC
Location: 90013 - 91371 (-)
Gene ID: HRGMv2_2140_10_93
Type: TF
Location: 91368 - 91817 (-)
Gene ID: HRGMv2_2140_10_94
Type: TC
Location: 91904 - 92767 (-)
Gene ID: HRGMv2_2140_10_95
Type:
Location: 93088 - 93552 (+)
Gene ID: HRGMv2_2140_10_96
Type: TC
Location: 93549 - 95708 (+)
Gene ID: HRGMv2_2140_10_97
Type: CAZyme
Location: 95733 - 97874 (+)
Gene ID: HRGMv2_2140_10_98
Type: pfam
Location: 97860 - 98822 (-)
Gene ID: HRGMv2_2140_10_99
Type: pfam
Location: 98902 - 99474 (-)
Gene ID: HRGMv2_2140_10_100
Type: CAZyme
Location: 99490 - 101367 (-)
Gene ID: HRGMv2_2140_10_101
Type: TC
Location: 101394 - 102953 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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